Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_24105 | Not Available | Positive | 5245694 - 5246131 | 16682.4 |
| multifunctional fatty acid oxidation complex subunit alpha | BK658_24110 | Not Available | Positive | 5246669 - 5248816 | 77378.1 |
| 3-ketoacyl-coa thiolase | BK658_24115 | Not Available | Positive | 5248847 - 5250022 | 41637.6 |
| tonb box-like protein | BK658_24120 | Not Available | Positive | 5250123 - 5250359 | 9101.76 |
| dna topoisomerase i | BK658_24125 | Not Available | Positive | 5250474 - 5253095 | 97099.1 |
| pasa protein | BK658_24130 | Not Available | Positive | 5253239 - 5253763 | 19581.7 |
| hypothetical protein | BK658_24135 | Not Available | Positive | 5253915 - 5254148 | 8539.23 |
| cdp-glycerol--udp-pyrophosphoryl-n- acetylglucosaminyl-n-acetylmannosamine glycerophosphotransferase | BK658_24140 | Not Available | Negative | 5254255 - 5254728 | 17279.8 |
| repressor lexa | BK658_24145 | Not Available | Negative | 5254739 - 5255347 | 22229.0 |
| tetr family transcriptional regulator | BK658_24150 | Not Available | Positive | 5255600 - 5256307 | 26095.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
