Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase 1 | BK658_24055 | Not Available | Negative | 5231272 - 5234022 | 99442.2 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | BK658_24060 | Not Available | Positive | 5234245 - 5235318 | 40343.8 |
| sulfurtransferase tusa | BK658_24065 | Not Available | Positive | 5235487 - 5235738 | 9313.23 |
| mate family efflux transporter | BK658_24070 | Not Available | Negative | 5235778 - 5237193 | 50272.9 |
| 4-phosphoerythronate dehydrogenase | BK658_24075 | Not Available | Positive | 5237344 - 5238486 | 41513.6 |
| hypothetical protein | BK658_24080 | Not Available | Negative | 5238661 - 5238840 | 6606.87 |
| abc transporter atp-binding protein | BK658_24085 | Not Available | Positive | 5239108 - 5240895 | 64871.6 |
| lytic murein transglycosylase | BK658_24090 | Not Available | Negative | 5240909 - 5242837 | 73941.5 |
| abc transporter atp-binding protein | BK658_24095 | Not Available | Positive | 5243051 - 5244967 | 70454.4 |
| universal stress protein uspa | BK658_24100 | Not Available | Negative | 5245152 - 5245589 | 16195.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
