Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine phosphoribosyltransferase | BK658_23955 | Not Available | Negative | 5210575 - 5211123 | 20083.4 |
| transcriptional regulator fnr | BK658_23960 | Not Available | Negative | 5211202 - 5211936 | 27198.8 |
| oxygen-independent coproporphyrinogen iii oxidase | BK658_23965 | Not Available | Negative | 5212016 - 5213398 | 52521.7 |
| cytochrome biogenesis protein | BK658_23970 | Not Available | Negative | 5213654 - 5214337 | 24300.9 |
| cytochrome oxidase maturation protein, cbb3-type | BK658_23975 | Not Available | Negative | 5214330 - 5214560 | 8112.47 |
| carbonate dehydratase | BK658_23980 | Not Available | Negative | 5214583 - 5217027 | 87559.5 |
| hypothetical protein | BK658_23985 | Not Available | Negative | 5217181 - 5217714 | 20046.0 |
| cytochrome c oxidase accessory protein ccog | BK658_23990 | Not Available | Negative | 5217726 - 5219141 | 53600.0 |
| phosphoesterase | BK658_23995 | Not Available | Positive | 5219616 - 5220626 | 37382.0 |
| cytochrome-c oxidase, cbb3-type subunit iii | BK658_24000 | Not Available | Negative | 5220705 - 5221682 | 35337.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
