Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine monooxygenase | BK658_23900 | Not Available | Positive | 5196767 - 5198104 | 49885.3 |
| magnesium-translocating p-type atpase | BK658_23905 | Not Available | Positive | 5198706 - 5201471 | 101942.0 |
| drug:proton antiporter | BK658_23915 | Not Available | Negative | 5201893 - 5202261 | 13315.7 |
| transcriptional regulator | BK658_23920 | Not Available | Negative | 5202398 - 5202712 | 11359.8 |
| ggdef domain-containing protein | BK658_23925 | Not Available | Positive | 5203203 - 5204903 | 63846.8 |
| amino acid abc transporter substrate-binding protein | BK658_23930 | Not Available | Negative | 5204907 - 5205665 | 28128.0 |
| hypothetical protein | BK658_23935 | Not Available | Positive | 5205812 - 5207917 | 75945.5 |
| ybab/ebfc family nucleoid-associated protein | BK658_23940 | Not Available | Positive | 5207985 - 5208323 | 12047.9 |
| recombination protein recr | BK658_23945 | Not Available | Positive | 5208503 - 5209105 | 21424.1 |
| acyl-coa dehydrogenase | BK658_23950 | Not Available | Positive | 5209294 - 5210442 | 41642.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
