Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic peptide transporter | BK658_23850 | Not Available | Negative | 5183201 - 5184850 | 60599.0 |
| chromophore maturation protein pvdo | BK658_23855 | Not Available | Negative | 5184960 - 5185829 | 31978.5 |
| class v aminotransferase | BK658_23860 | Not Available | Negative | 5185868 - 5187148 | 47969.1 |
| peptidase m19 | BK658_23865 | Not Available | Negative | 5187179 - 5188528 | 49296.7 |
| pvdj/pvdd/pvdp-like protein | BK658_23870 | Not Available | Positive | 5188788 - 5190425 | 62161.0 |
| hypothetical protein | BK658_23875 | Not Available | Positive | 5190764 - 5191129 | 13333.6 |
| rnd transporter | BK658_23880 | Not Available | Negative | 5191274 - 5192668 | 50193.2 |
| macrolide abc transporter permease/atp-binding protein macb | BK658_23885 | Not Available | Negative | 5192676 - 5194649 | 69849.3 |
| efflux transporter periplasmic adaptor subunit | BK658_23890 | Not Available | Negative | 5194650 - 5195828 | 42145.3 |
| rna polymerase subunit sigma | BK658_23895 | Not Available | Positive | 5196150 - 5196632 | 18653.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
