Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_23800 | Not Available | Negative | 5149141 - 5149548 | 15352.5 |
| hypothetical protein | BK658_23805 | Not Available | Positive | 5150082 - 5150453 | 13580.1 |
| isopentenyl-diphosphate delta-isomerase | BK658_23810 | Not Available | Negative | 5150916 - 5151461 | 20731.8 |
| glucoamylase | BK658_23815 | Not Available | Negative | 5152034 - 5153857 | 68846.6 |
| abc transporter permease | BK658_23820 | Not Available | Positive | 5154068 - 5155240 | 40298.4 |
| thioesterase | BK658_23825 | Not Available | Positive | 5155444 - 5156178 | 27212.2 |
| non-ribosomal peptide synthetase | BK658_23830 | Not Available | Positive | 5156344 - 5167395 | 405027.0 |
| non-ribosomal peptide synthetase | BK658_23835 | Not Available | Positive | 5167395 - 5179169 | 433197.0 |
| lipase | BK658_23840 | Not Available | Positive | 5179227 - 5180189 | 34775.3 |
| tonb-dependent receptor | BK658_23845 | Not Available | Negative | 5180559 - 5183024 | 89969.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
