Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | BK658_23700 | Not Available | Positive | 5127940 - 5129844 | 69266.6 |
| abc transporter atp-binding protein | BK658_23705 | Not Available | Positive | 5129844 - 5131562 | 62918.4 |
| peptidase s8 and s53 subtilisin kexin sedolisin | BK658_23710 | Not Available | Positive | 5131552 - 5132229 | 24256.7 |
| fad-dependent oxidoreductase | BK658_23715 | Not Available | Positive | 5132226 - 5133530 | 47751.8 |
| aldehyde dehydrogenase | BK658_23720 | Not Available | Negative | 5133654 - 5135144 | 53095.2 |
| haloacid dehalogenase | BK658_23725 | Not Available | Negative | 5135291 - 5135962 | 24677.6 |
| quinohemoprotein amine dehydrogenase subunit alpha | BK658_23730 | Not Available | Positive | 5136276 - 5137856 | 57091.9 |
| quinohemoprotein amine dehydrogenase maturation protein | BK658_23735 | Not Available | Positive | 5137950 - 5139380 | 53281.3 |
| quinohemoprotein amine dehydrogenase | BK658_23740 | Not Available | Positive | 5139382 - 5139705 | 11755.7 |
| quinohemoprotein amine dehydrogenase subunit beta | BK658_23745 | Not Available | Positive | 5139743 - 5140861 | 41435.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
