Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_23650 | Not Available | Negative | 5118932 - 5119291 | 12939.5 |
| zinc-binding protein | BK658_23655 | Not Available | Positive | 5119425 - 5120036 | 21806.6 |
| methionine abc transporter atp-binding protein | BK658_23660 | Not Available | Positive | 5120172 - 5120882 | 25821.0 |
| peptide abc transporter permease | BK658_23665 | Not Available | Positive | 5120884 - 5122149 | 45929.2 |
| hypothetical protein | BK658_23670 | Not Available | Positive | 5122161 - 5122679 | 18755.7 |
| hypothetical protein | BK658_23675 | Not Available | Negative | 5122655 - 5122885 | 8552.15 |
| outer membrane protein ompw | BK658_23680 | Not Available | Positive | 5122912 - 5123610 | 24818.6 |
| penicillin-binding protein 2 | BK658_23685 | Not Available | Positive | 5123915 - 5125807 | 70276.4 |
| lysr family transcriptional regulator | BK658_23690 | Not Available | Negative | 5125817 - 5126773 | 35966.2 |
| class ii aldolase | BK658_23695 | Not Available | Positive | 5126945 - 5127700 | 28130.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
