Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2138 domain-containing protein | BK658_23550 | Not Available | Negative | 5101688 - 5103412 | 62928.6 |
| hypothetical protein | BK658_23555 | Not Available | Negative | 5103464 - 5104255 | 28953.2 |
| exodeoxyribonuclease vii small subunit | BK658_23560 | Not Available | Positive | 5104598 - 5104840 | 8834.29 |
| geranyl transferase | BK658_23565 | Not Available | Positive | 5104837 - 5105724 | 31561.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BK658_23570 | Not Available | Positive | 5105835 - 5107733 | 68426.7 |
| cobalamin-binding protein | BK658_23575 | Not Available | Negative | 5107939 - 5108736 | 29109.6 |
| mfs transporter | BK658_23580 | Not Available | Negative | 5108736 - 5109155 | 15287.3 |
| gtp cyclohydrolase ii | BK658_23585 | Not Available | Negative | 5109152 - 5109769 | 22314.9 |
| abc transporter substrate-binding protein | BK658_23590 | Not Available | Negative | 5109881 - 5110636 | 28614.1 |
| phosphatidylglycerophosphatase a | BK658_23595 | Not Available | Negative | 5110676 - 5111179 | 19227.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
