Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | BK658_23500 | Not Available | Negative | 5087687 - 5088775 | 39624.4 |
| dna mismatch repair protein mutt | BK658_23505 | Not Available | Negative | 5088772 - 5089284 | 19776.6 |
| aspartate aminotransferase | BK658_23510 | Not Available | Negative | 5089285 - 5090400 | 40440.0 |
| dehydrogenase | BK658_23515 | Not Available | Negative | 5090390 - 5091469 | 39857.9 |
| hypothetical protein | BK658_23520 | Not Available | Positive | 5092312 - 5092761 | 16616.4 |
| cell filamentation protein fic | BK658_23525 | Not Available | Positive | 5092900 - 5094045 | 42909.9 |
| hypothetical protein | BK658_23530 | Not Available | Negative | 5094036 - 5094848 | 29275.8 |
| hypothetical protein | BK658_23535 | Not Available | Negative | 5094852 - 5096483 | 60503.8 |
| hypothetical protein | BK658_23540 | Not Available | Negative | 5096485 - 5100990 | 164263.0 |
| hypothetical protein | BK658_23545 | Not Available | Negative | 5101053 - 5101718 | 24690.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
