Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic pyrophosphatase | BK658_23450 | Not Available | Positive | 5078225 - 5078752 | 19248.0 |
| transcriptional regulator | BK658_23455 | Not Available | Positive | 5078984 - 5079733 | 27948.5 |
| haloacid dehalogenase | BK658_23460 | Not Available | Negative | 5080210 - 5080866 | 23785.6 |
| mfs transporter | BK658_23465 | Not Available | Negative | 5080873 - 5082108 | 43352.3 |
| abc transporter permease | BK658_23470 | Not Available | Negative | 5082105 - 5083019 | 32645.8 |
| gdp-mannose pyrophosphatase | BK658_23475 | Not Available | Negative | 5083028 - 5083624 | 22820.1 |
| methylthioadenosine phosphorylase | BK658_23480 | Not Available | Negative | 5083621 - 5084529 | 32156.5 |
| dihydrorhizobitoxine desaturase | BK658_23485 | Not Available | Negative | 5084526 - 5085638 | 42465.7 |
| phosphoglycolate phosphatase | BK658_23490 | Not Available | Negative | 5085641 - 5086339 | 25399.1 |
| fad-dependent oxidoreductase | BK658_23495 | Not Available | Negative | 5086336 - 5087706 | 50629.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
