Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic acid decarboxylase | BK658_23400 | Not Available | Negative | 5065730 - 5066362 | 22819.6 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | BK658_23405 | Not Available | Negative | 5066359 - 5067708 | 48303.2 |
| sigma-54-dependent fis family transcriptional regulator | BK658_23410 | Not Available | Negative | 5067823 - 5069739 | 70285.4 |
| aldehyde dehydrogenase | BK658_23415 | Not Available | Positive | 5070155 - 5071675 | 54827.9 |
| ethanolamine permease | BK658_23420 | Not Available | Positive | 5071955 - 5073325 | 48737.7 |
| ethanolamine ammonia-lyase | BK658_23425 | Not Available | Positive | 5073450 - 5074844 | 50021.1 |
| ethanolamine ammonia-lyase | BK658_23430 | Not Available | Positive | 5074856 - 5075680 | 29956.0 |
| gnat family n-acetyltransferase | BK658_23435 | Not Available | Positive | 5075810 - 5076271 | 17897.5 |
| hypothetical protein | BK658_23440 | Not Available | Positive | 5076627 - 5077283 | 23885.8 |
| zinc-dependent peptidase | BK658_23445 | Not Available | Positive | 5077290 - 5078102 | 31215.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
