Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| octanoyltransferase | BK658_23300 | Not Available | Negative | 5047433 - 5048080 | 23602.5 |
| hypothetical protein | BK658_23305 | Not Available | Negative | 5048080 - 5048355 | 10115.2 |
| serine-type d-ala-d-ala carboxypeptidase | BK658_23310 | Not Available | Negative | 5048436 - 5049593 | 42140.8 |
| hypothetical protein | BK658_23315 | Not Available | Negative | 5049923 - 5050933 | 36167.2 |
| lytic murein transglycosylase b | BK658_23320 | Not Available | Negative | 5050933 - 5051943 | 37788.9 |
| rod shape-determining protein roda | BK658_23325 | Not Available | Negative | 5051961 - 5053064 | 40133.8 |
| penicillin-binding protein 2 | BK658_23330 | Not Available | Negative | 5053096 - 5054991 | 70310.5 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | BK658_23335 | Not Available | Negative | 5055004 - 5055471 | 17707.5 |
| ribosome silencing factor | BK658_23340 | Not Available | Negative | 5055481 - 5055975 | 18052.6 |
| nicotinic acid mononucleotide adenylyltransferase | BK658_23345 | Not Available | Negative | 5056049 - 5056738 | 24881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
