Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | BK658_23200 | Not Available | Negative | 5025163 - 5027550 | 88233.0 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | BK658_23205 | Not Available | Positive | 5027925 - 5028722 | 28354.0 |
| thiamine-phosphate diphosphorylase | BK658_23210 | Not Available | Positive | 5028741 - 5029364 | 22264.7 |
| glutamate-1-semialdehyde-2,1-aminomutase | BK658_23215 | Not Available | Positive | 5029397 - 5030680 | 45216.4 |
| hypothetical protein | BK658_23220 | Not Available | Positive | 5030905 - 5031459 | 19996.9 |
| hypothetical protein | BK658_23225 | Not Available | Negative | 5031580 - 5031909 | 12572.3 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | BK658_23230 | Not Available | Positive | 5032045 - 5033373 | 49486.0 |
| phoh family protein | BK658_23235 | Not Available | Positive | 5033578 - 5034597 | 38451.6 |
| rrna maturation rnase ybey | BK658_23240 | Not Available | Positive | 5034590 - 5035084 | 18537.6 |
| magnesium/cobalt efflux protein | BK658_23245 | Not Available | Positive | 5035090 - 5035929 | 31422.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
