Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | BK658_23150 | Not Available | Positive | 5013366 - 5014445 | 40743.5 |
| atp-dependent helicase hrpb | BK658_23155 | Not Available | Negative | 5014630 - 5017161 | 93218.2 |
| polyribonucleotide nucleotidyltransferase | BK658_23160 | Not Available | Positive | 5017271 - 5017690 | 14944.3 |
| divalent metal cation transporter fief | BK658_23165 | Not Available | Positive | 5017719 - 5018624 | 32434.4 |
| glycine zipper family protein | BK658_23170 | Not Available | Negative | 5018609 - 5019712 | 41926.3 |
| asnc family transcriptional regulator | BK658_23175 | Not Available | Positive | 5020148 - 5020627 | 18069.9 |
| hypothetical protein | BK658_23180 | Not Available | Positive | 5020845 - 5021054 | 7529.63 |
| pseudouridine synthase | BK658_23185 | Not Available | Negative | 5021049 - 5021690 | 23992.0 |
| amp nucleosidase | BK658_23190 | Not Available | Negative | 5021762 - 5023225 | 54488.3 |
| dna alkylation response protein | BK658_23195 | Not Available | Negative | 5023439 - 5025088 | 59841.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
