Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase ii | BK658_23100 | Not Available | Negative | 5003736 - 5004605 | 32466.5 |
| gnat family n-acetyltransferase | BK658_23105 | Not Available | Negative | 5004712 - 5005281 | 21324.6 |
| histone deacetylase | BK658_23110 | Not Available | Positive | 5005359 - 5006279 | 34084.5 |
| nad(fad)-utilizing dehydrogenase | BK658_23115 | Not Available | Positive | 5006538 - 5007815 | 45221.2 |
| dead/deah box helicase | BK658_23120 | Not Available | Negative | 5007964 - 5009298 | 48831.5 |
| drug/metabolite exporter yeda | BK658_23125 | Not Available | Negative | 5009351 - 5010277 | 32669.9 |
| dna polymerase iii subunit epsilon | BK658_23130 | Not Available | Negative | 5010403 - 5011014 | 22616.5 |
| nuclease | BK658_23135 | Not Available | Negative | 5011037 - 5011516 | 17585.0 |
| abc transporter substrate-binding protein | BK658_23140 | Not Available | Negative | 5011655 - 5012440 | 27563.3 |
| hypothetical protein | BK658_23145 | Not Available | Positive | 5012618 - 5013292 | 24920.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
