Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK658_23000 | Not Available | Negative | 4982498 - 4983427 | 33955.1 |
| nadph:quinone reductase | BK658_23005 | Not Available | Positive | 4983543 - 4984556 | 36554.9 |
| bcr/cfla family drug resistance efflux transporter | BK658_23010 | Not Available | Negative | 4984917 - 4986110 | 41320.9 |
| copper resistance protein copz | BK658_23015 | Not Available | Negative | 4986205 - 4986402 | 6759.09 |
| hypothetical protein | BK658_23020 | Not Available | Positive | 4986817 - 4987194 | 13671.6 |
| copper-translocating p-type atpase | BK658_23025 | Not Available | Positive | 4987397 - 4989793 | 83807.7 |
| cu(i)-responsive transcriptional regulator | BK658_23030 | Not Available | Positive | 4989790 - 4990203 | 15440.4 |
| mfs transporter | BK658_23035 | Not Available | Negative | 4990157 - 4991392 | 43825.6 |
| 4-oxalocrotonate tautomerase | BK658_23040 | Not Available | Negative | 4991462 - 4991665 | 7622.03 |
| type ii 3-dehydroquinate dehydratase | BK658_23045 | Not Available | Positive | 4991960 - 4992400 | 15839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
