Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonate-semialdehyde dehydrogenase (acylating) | BK658_22945 | Not Available | Negative | 4969316 - 4970809 | 53311.1 |
| aspartate aminotransferase family protein | BK658_22950 | Not Available | Negative | 4970885 - 4972234 | 48561.2 |
| lysr family transcriptional regulator | BK658_22955 | Not Available | Positive | 4972374 - 4973294 | 34156.0 |
| tetr family transcriptional regulator | BK658_22960 | Not Available | Positive | 4973404 - 4974054 | 24394.2 |
| thymidylate synthase | BK658_22965 | Not Available | Positive | 4974066 - 4974647 | 20892.0 |
| short-chain dehydrogenase | BK658_22970 | Not Available | Positive | 4975260 - 4975946 | 24052.0 |
| 8-oxoguanine deaminase | BK658_22975 | Not Available | Positive | 4976201 - 4977559 | 48924.0 |
| adenosine deaminase | BK658_22985 | Not Available | Positive | 4978849 - 4979802 | 36142.0 |
| mfs transporter | BK658_22990 | Not Available | Negative | 4979920 - 4981311 | 50644.9 |
| transcriptional regulator | BK658_22995 | Not Available | Negative | 4981446 - 4982180 | 26292.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
