Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate ammonia-lyase | BK658_22730 | Not Available | Negative | 4914371 - 4915795 | 51126.2 |
| lysr family transcriptional regulator | BK658_22735 | Not Available | Positive | 4915976 - 4916902 | 33559.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | BK658_22740 | Not Available | Positive | 4917224 - 4917715 | 16858.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | BK658_22745 | Not Available | Positive | 4917727 - 4918809 | 38672.4 |
| transglycosylase | BK658_22750 | Not Available | Positive | 4918916 - 4919164 | 8496.85 |
| hypothetical protein | BK658_22755 | Not Available | Positive | 4919253 - 4919789 | 19407.6 |
| d-hexose-6-phosphate mutarotase | BK658_22760 | Not Available | Negative | 4919939 - 4920838 | 33144.4 |
| acyl-coa thioesterase | BK658_22765 | Not Available | Negative | 4920912 - 4921316 | 14459.4 |
| mfs transporter | BK658_22770 | Not Available | Positive | 4921683 - 4922981 | 46805.4 |
| phosphate-binding protein | BK658_22775 | Not Available | Positive | 4923176 - 4924180 | 35179.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
