Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | BK658_22680 | Not Available | Negative | 4899341 - 4900012 | 24957.5 |
| gnat family n-acetyltransferase | BK658_22685 | Not Available | Negative | 4900030 - 4900476 | 17048.2 |
| transcriptional regulator | BK658_22690 | Not Available | Negative | 4900479 - 4901108 | 22865.1 |
| gntr family transcriptional regulator | BK658_22695 | Not Available | Positive | 4901214 - 4902758 | 55781.2 |
| hypothetical protein | BK658_22700 | Not Available | Negative | 4902885 - 4907510 | 172556.0 |
| polyamine abc transporter substrate-binding protein | BK658_22705 | Not Available | Negative | 4907671 - 4908771 | 40705.1 |
| acetylpolyamine amidohydrolase | BK658_22710 | Not Available | Negative | 4908784 - 4909815 | 37625.2 |
| arac family transcriptional regulator | BK658_22715 | Not Available | Negative | 4910118 - 4911113 | 36944.4 |
| l-asparaginase 1 | BK658_22720 | Not Available | Negative | 4911278 - 4912282 | 35363.7 |
| sodium:alanine symporter | BK658_22725 | Not Available | Negative | 4912447 - 4913898 | 52100.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
