Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal kinase | BK658_22580 | Not Available | Positive | 4874907 - 4875779 | 31076.6 |
| acyl-coa thioesterase | BK658_22585 | Not Available | Negative | 4875845 - 4876327 | 18085.6 |
| cation/h(+) antiporter | BK658_22590 | Not Available | Positive | 4876586 - 4878349 | 64045.3 |
| cell wall assembly protein | BK658_22595 | Not Available | Negative | 4878371 - 4878778 | 15578.1 |
| hypothetical protein | BK658_22600 | Not Available | Negative | 4878915 - 4879787 | 30955.0 |
| transporter | BK658_22605 | Not Available | Negative | 4879966 - 4880406 | 15470.4 |
| dna helicase ii | BK658_22610 | Not Available | Negative | 4880579 - 4882762 | 81140.6 |
| diguanylate cyclase | BK658_22615 | Not Available | Positive | 4883024 - 4885891 | 107223.0 |
| hypothetical protein | BK658_22620 | Not Available | Negative | 4885981 - 4886295 | 11715.1 |
| transcriptional regulator | BK658_22625 | Not Available | Positive | 4886722 - 4887588 | 31207.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
