Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter permease | BK658_22530 | Not Available | Negative | 4866755 - 4867621 | 30337.8 |
| manganese abc transporter atp-binding protein | BK658_22535 | Not Available | Negative | 4867621 - 4868289 | 24148.4 |
| gtp cyclohydrolase | BK658_22540 | Not Available | Negative | 4868286 - 4869182 | 32621.2 |
| n-acetylmuramoyl-l-alanine amidase | BK658_22545 | Not Available | Positive | 4869269 - 4870480 | 43722.1 |
| glutamine synthetase | BK658_22550 | Not Available | Negative | 4870477 - 4870854 | 13268.5 |
| 4-hydroxytetrahydrobiopterin dehydratase | BK658_22555 | Not Available | Positive | 4870993 - 4872201 | 45466.2 |
| hypothetical protein | BK658_22560 | Not Available | Positive | 4872201 - 4872842 | 23514.4 |
| nadh:ubiquinone oxidoreductase | BK658_22565 | Not Available | Negative | 4872844 - 4873200 | 12881.5 |
| cobalamin biosynthesis protein cobw | BK658_22570 | Not Available | Positive | 4873228 - 4874199 | 35137.4 |
| hypothetical protein | BK658_22575 | Not Available | Negative | 4874213 - 4874611 | 15089.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
