Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cof synthetase | BK658_22330 | Not Available | Positive | 4820191 - 4821474 | 48616.8 |
| inositol phosphorylceramide synthase | BK658_22335 | Not Available | Positive | 4821471 - 4822088 | 22855.8 |
| fatty acid hydroxylase | BK658_22340 | Not Available | Positive | 4822088 - 4823227 | 42726.2 |
| acyl-coa desaturase | BK658_22345 | Not Available | Positive | 4823220 - 4824326 | 42519.4 |
| acyl-coa desaturase | BK658_22350 | Not Available | Positive | 4824326 - 4825411 | 41994.1 |
| hypothetical protein | BK658_22355 | Not Available | Positive | 4825466 - 4826017 | 19828.6 |
| hypothetical protein | BK658_22360 | Not Available | Negative | 4826251 - 4826481 | 8986.65 |
| sodium-independent anion transporter | BK658_22365 | Not Available | Positive | 4826644 - 4828302 | 58596.4 |
| copg family transcriptional regulator | BK658_22370 | Not Available | Negative | 4828366 - 4828551 | 6816.29 |
| sulfonate abc transporter permease | BK658_22375 | Not Available | Positive | 4829334 - 4831076 | 64756.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
