Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | BK658_22180 | Not Available | Negative | 4785039 - 4785869 | 31108.8 |
| integrase | BK658_22185 | Not Available | Negative | 4785853 - 4787823 | 75671.5 |
| hypothetical protein | BK658_22190 | Not Available | Positive | 4788026 - 4788304 | 10633.0 |
| dna gyrase subunit b | BK658_22195 | Not Available | Negative | 4789425 - 4791842 | 90159.4 |
| dna replication/repair protein recf | BK658_22200 | Not Available | Negative | 4791847 - 4792950 | 41657.9 |
| dna polymerase iii subunit beta | BK658_22205 | Not Available | Negative | 4792971 - 4794074 | 40516.9 |
| chromosomal replication initiation protein dnaa | BK658_22210 | Not Available | Negative | 4794114 - 4795631 | 56667.8 |
| hypothetical protein | BK658_22215 | Not Available | Negative | 4796264 - 4796659 | 14962.8 |
| membrane protein insertase yidc | BK658_22220 | Not Available | Positive | 4796990 - 4798672 | 61975.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | BK658_22225 | Not Available | Positive | 4798752 - 4800122 | 49011.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
