Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BK658_21980 | Not Available | Positive | 4745051 - 4745539 | 18154.3 |
| gnat family n-acetyltransferase | BK658_21985 | Not Available | Positive | 4745864 - 4746361 | 18166.8 |
| pyridoxamine 5'-phosphate oxidase | BK658_21990 | Not Available | Negative | 4746506 - 4747111 | 22298.8 |
| gnat family n-acetyltransferase | BK658_21995 | Not Available | Negative | 4747145 - 4747630 | 17987.7 |
| dehydrogenase | BK658_22000 | Not Available | Positive | 4747865 - 4748212 | 12331.6 |
| rna polymerase subunit sigma-24 | BK658_22005 | Not Available | Positive | 4748232 - 4749467 | 45971.3 |
| lysr family transcriptional regulator | BK658_22010 | Not Available | Negative | 4749512 - 4750366 | 31149.2 |
| hypothetical protein | BK658_22015 | Not Available | Positive | 4750456 - 4750893 | 16131.4 |
| short-chain dehydrogenase | BK658_22020 | Not Available | Negative | 4750940 - 4751698 | 26490.9 |
| lysr family transcriptional regulator | BK658_22025 | Not Available | Positive | 4751820 - 4752716 | 33394.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
