Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | BK658_21880 | Not Available | Positive | 4724362 - 4726062 | 61813.7 |
| hypothetical protein | BK658_21885 | Not Available | Negative | 4726214 - 4726591 | 14407.5 |
| csbd family protein | BK658_21890 | Not Available | Positive | 4726790 - 4726981 | 6583.92 |
| ribonuclease bn | BK658_21895 | Not Available | Positive | 4727160 - 4728104 | 34927.5 |
| peptide deformylase | BK658_21900 | Not Available | Positive | 4728107 - 4728646 | 20136.2 |
| gnat family n-acetyltransferase | BK658_21905 | Not Available | Negative | 4728661 - 4729083 | 15763.4 |
| fatty acid desaturase | BK658_21910 | Not Available | Positive | 4729458 - 4730399 | 36783.6 |
| phosphate abc transporter substrate-binding protein | BK658_21915 | Not Available | Positive | 4730408 - 4731199 | 29226.3 |
| rna polymerase subunit sigma | BK658_21920 | Not Available | Positive | 4731353 - 4731895 | 20265.3 |
| abc transporter substrate-binding protein | BK658_21925 | Not Available | Positive | 4731892 - 4732905 | 37056.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
