Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | BK658_21830 | Not Available | Positive | 4714339 - 4715808 | 55212.1 |
| 6-phosphogluconolactonase | BK658_21835 | Not Available | Positive | 4715795 - 4716508 | 25348.7 |
| keto-deoxy-phosphogluconate aldolase | BK658_21840 | Not Available | Positive | 4716526 - 4717191 | 23252.5 |
| intradiol ring-cleavage dioxygenase | BK658_21845 | Not Available | Positive | 4717381 - 4718106 | 26793.7 |
| class v aminotransferase | BK658_21850 | Not Available | Negative | 4718145 - 4719326 | 44330.3 |
| hypothetical protein | BK658_21855 | Not Available | Negative | 4719348 - 4719584 | 8873.87 |
| aldehyde dehydrogenase | BK658_21860 | Not Available | Positive | 4719788 - 4720255 | 17210.3 |
| 3-hydroxybutyryl-coa dehydratase | BK658_21865 | Not Available | Negative | 4720350 - 4720820 | 17059.6 |
| alpha/beta hydrolase | BK658_21870 | Not Available | Negative | 4720863 - 4721807 | 34995.8 |
| long-chain fatty acid--coa ligase | BK658_21875 | Not Available | Positive | 4722302 - 4723990 | 61996.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
