Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | BK658_21780 | Not Available | Positive | 4702420 - 4703151 | 27331.7 |
| two-component sensor histidine kinase | BK658_21785 | Not Available | Positive | 4703141 - 4704604 | 54170.7 |
| sugar isomerase | BK658_21790 | Not Available | Positive | 4704809 - 4706068 | 46801.9 |
| sugar abc transporter substrate-binding protein | BK658_21795 | Not Available | Positive | 4706186 - 4707493 | 46119.9 |
| sugar abc transporter permease | BK658_21800 | Not Available | Positive | 4707649 - 4708557 | 33791.2 |
| sugar abc transporter permease | BK658_21805 | Not Available | Positive | 4708550 - 4709395 | 30645.2 |
| sugar abc transporter atp-binding protein | BK658_21810 | Not Available | Positive | 4709399 - 4710559 | 42173.4 |
| porin | BK658_21815 | Not Available | Positive | 4710753 - 4712099 | 49509.5 |
| d-hexose-6-phosphate mutarotase | BK658_21820 | Not Available | Positive | 4712228 - 4713082 | 32407.3 |
| transcriptional regulator hexr | BK658_21825 | Not Available | Negative | 4713272 - 4714141 | 31496.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
