Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyladenine dna glycosylase 2 | BK658_21730 | Not Available | Positive | 4690083 - 4690946 | 30947.7 |
| acyl-coa transferase | BK658_21735 | Not Available | Negative | 4691067 - 4692413 | 48265.4 |
| biliverdin-producing heme oxygenase | BK658_21740 | Not Available | Negative | 4692585 - 4693193 | 21836.9 |
| tonb-dependent receptor | BK658_21745 | Not Available | Negative | 4693306 - 4695870 | 93589.9 |
| glycerol-3-phosphate abc transporter substrate-binding protein | BK658_21750 | Not Available | Negative | 4695991 - 4696962 | 35812.6 |
| rna polymerase subunit sigma-24 | BK658_21755 | Not Available | Negative | 4697081 - 4697599 | 19619.7 |
| methylglyoxal synthase | BK658_21760 | Not Available | Negative | 4697675 - 4698139 | 17287.0 |
| type i glyceraldehyde-3-phosphate dehydrogenase | BK658_21765 | Not Available | Negative | 4698165 - 4699166 | 36185.1 |
| phosphogluconate dehydratase | BK658_21770 | Not Available | Positive | 4699391 - 4701217 | 65300.8 |
| glucokinase | BK658_21775 | Not Available | Positive | 4701214 - 4702173 | 33573.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
