Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp:cob(i)alamin adenosyltransferase | BK658_21530 | Not Available | Negative | 4650536 - 4651117 | 21039.5 |
| pas domain-containing sensor histidine kinase | BK658_21535 | Not Available | Negative | 4651120 - 4653159 | 75779.4 |
| 2-dehydropantoate 2-reductase | BK658_21540 | Not Available | Negative | 4653205 - 4654122 | 33212.6 |
| yajq family cyclic di-gmp-binding protein | BK658_21545 | Not Available | Positive | 4654266 - 4654751 | 18191.1 |
| mechanosensitive ion channel protein mscs | BK658_21550 | Not Available | Positive | 4654891 - 4655727 | 30235.1 |
| porin | BK658_21555 | Not Available | Negative | 4655970 - 4657328 | 49165.7 |
| hit family protein | BK658_21560 | Not Available | Positive | 4658255 - 4658680 | 16244.3 |
| hypothetical protein | BK658_21565 | Not Available | Positive | 4658684 - 4658890 | 7965.34 |
| cold-shock protein | BK658_21570 | Not Available | Negative | 4658986 - 4659588 | 21888.0 |
| hypothetical protein | BK658_21575 | Not Available | Negative | 4659968 - 4660150 | 6731.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
