Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_21480 | Not Available | Positive | 4638204 - 4638404 | 6879.9 |
| hypothetical protein | BK658_21485 | Not Available | Negative | 4638391 - 4639386 | 36399.4 |
| duf2334 domain-containing protein | BK658_21490 | Not Available | Negative | 4639383 - 4640159 | 29950.7 |
| glycoside hydrolase | BK658_21495 | Not Available | Negative | 4640152 - 4641261 | 40557.3 |
| chemotaxis protein | BK658_21500 | Not Available | Negative | 4641463 - 4643352 | 67658.3 |
| rna-binding protein | BK658_21505 | Not Available | Negative | 4643802 - 4644257 | 16845.5 |
| preprotein translocase subunit seca | BK658_21510 | Not Available | Positive | 4644564 - 4647299 | 102849.0 |
| bifunctional ornithine acetyltransferase/n-acetylglutamate synthase | BK658_21515 | Not Available | Positive | 4647438 - 4648655 | 42393.9 |
| glutathione s-transferase | BK658_21520 | Not Available | Positive | 4648829 - 4649461 | 23300.1 |
| hypothetical protein | BK658_21525 | Not Available | Positive | 4649458 - 4650402 | 33725.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
