Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux protein | BK658_21180 | Not Available | Negative | 4551983 - 4555009 | 110047.0 |
| efflux transporter periplasmic adaptor subunit | BK658_21185 | Not Available | Negative | 4555023 - 4556174 | 41089.1 |
| hypothetical protein | BK658_21190 | Not Available | Negative | 4556438 - 4557535 | 39903.8 |
| imelysin | BK658_21195 | Not Available | Negative | 4557550 - 4558614 | 38590.0 |
| thiol oxidoreductase | BK658_21200 | Not Available | Negative | 4558659 - 4560086 | 51041.5 |
| peptidase | BK658_21205 | Not Available | Negative | 4560360 - 4561700 | 47178.1 |
| ggdef-domain containing protein | BK658_21210 | Not Available | Negative | 4561923 - 4563974 | 77293.0 |
| superoxide dismutase | BK658_21215 | Not Available | Negative | 4564312 - 4564908 | 22003.7 |
| lysine transporter lyse | BK658_21220 | Not Available | Negative | 4565084 - 4565686 | 21340.6 |
| acetyltransferase | BK658_21225 | Not Available | Negative | 4565692 - 4566093 | 14377.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
