Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iscs subfamily cysteine desulfurase | BK658_21030 | Not Available | Positive | 4522380 - 4523549 | 40949.5 |
| xaa-pro aminopeptidase | BK658_21035 | Not Available | Positive | 4523608 - 4525416 | 65539.0 |
| lysr family transcriptional regulator | BK658_21040 | Not Available | Negative | 4525432 - 4526346 | 33613.2 |
| quinone oxidoreductase | BK658_21045 | Not Available | Positive | 4526461 - 4527459 | 34960.2 |
| hypothetical protein | BK658_21050 | Not Available | Negative | 4527633 - 4527914 | 9817.91 |
| eama family transporter | BK658_21055 | Not Available | Negative | 4528082 - 4528969 | 30902.1 |
| ribonuclease t | BK658_21060 | Not Available | Negative | 4529280 - 4529954 | 24618.8 |
| dihydroorotase | BK658_21065 | Not Available | Negative | 4529951 - 4530997 | 38624.3 |
| hypothetical protein | BK658_21070 | Not Available | Positive | 4531154 - 4532062 | 32934.3 |
| argininosuccinate synthase | BK658_21075 | Not Available | Positive | 4532192 - 4533409 | 45386.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
