Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter permease | BK658_20980 | Not Available | Negative | 4514885 - 4515784 | 30869.1 |
| manganese abc transporter atp-binding protein | BK658_20985 | Not Available | Negative | 4515784 - 4516536 | 27214.2 |
| abc transporter substrate-binding protein | BK658_20990 | Not Available | Negative | 4516533 - 4517471 | 34215.2 |
| hypothetical protein | BK658_20995 | Not Available | Negative | 4517506 - 4518081 | 20583.3 |
| hypothetical protein | BK658_21000 | Not Available | Negative | 4518078 - 4518410 | 11423.6 |
| thiamine pyrophosphate-binding protein | BK658_21005 | Not Available | Negative | 4518407 - 4518949 | 19738.8 |
| peptidase | BK658_21010 | Not Available | Negative | 4518946 - 4520157 | 44806.7 |
| glyoxalase | BK658_21015 | Not Available | Negative | 4520456 - 4520914 | 16683.8 |
| hypothetical protein | BK658_21020 | Not Available | Positive | 4521201 - 4521470 | 9703.49 |
| lysine transporter lyse | BK658_21025 | Not Available | Positive | 4521570 - 4522184 | 22281.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
