Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | BK658_20930 | Not Available | Positive | 4504905 - 4505717 | 29835.1 |
| thiol:disulfide interchange protein dsbg | BK658_20935 | Not Available | Negative | 4505836 - 4506603 | 27982.0 |
| peroxiredoxin | BK658_20940 | Not Available | Negative | 4506579 - 4507445 | 31146.9 |
| thiol:disulfide interchange protein | BK658_20945 | Not Available | Negative | 4507445 - 4509181 | 61762.7 |
| dna-binding response regulator | BK658_20950 | Not Available | Positive | 4509335 - 4510015 | 24696.7 |
| two-component sensor histidine kinase | BK658_20955 | Not Available | Positive | 4510012 - 4511334 | 48224.5 |
| gnat family n-acetyltransferase | BK658_20960 | Not Available | Positive | 4511452 - 4511937 | 17557.3 |
| diaminobutyrate--2-oxoglutarate transaminase | BK658_20965 | Not Available | Positive | 4512081 - 4513493 | 50293.3 |
| mbth family protein | BK658_20970 | Not Available | Positive | 4513575 - 4513790 | 8396.04 |
| metal abc transporter substrate-binding protein | BK658_20975 | Not Available | Negative | 4513913 - 4514884 | 34490.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
