Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | BK658_20880 | Not Available | Negative | 4481482 - 4482279 | 28150.2 |
| acyl-coa dehydrogenase | BK658_20885 | Not Available | Negative | 4482276 - 4483433 | 42588.6 |
| acetyl-coa carboxylase carboxyltransferase subunit | BK658_20890 | Not Available | Negative | 4483563 - 4485179 | 58021.8 |
| 2,4-dienoyl-coa reductase | BK658_20895 | Not Available | Negative | 4485183 - 4486052 | 30305.4 |
| terpene utilization protein atua | BK658_20900 | Not Available | Negative | 4486065 - 4487855 | 63837.1 |
| tetr family transcriptional regulator | BK658_20905 | Not Available | Positive | 4488035 - 4488658 | 23297.1 |
| amino acid abc transporter substrate-binding protein | BK658_20910 | Not Available | Positive | 4488761 - 4489558 | 30082.0 |
| gnat family n-acetyltransferase | BK658_20915 | Not Available | Positive | 4489655 - 4490668 | 38954.3 |
| rna polymerase factor sigma-70 | BK658_20920 | Not Available | Negative | 4490802 - 4491350 | 20515.6 |
| non-ribosomal peptide synthase/polyketide synthase | BK658_20925 | Not Available | Positive | 4491721 - 4504734 | 481703.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
