Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | BK658_20680 | Not Available | Negative | 4440770 - 4442116 | 49948.3 |
| spermidine synthase | BK658_20685 | Not Available | Positive | 4442273 - 4443028 | 28067.6 |
| enoyl-coa hydratase | BK658_20690 | Not Available | Negative | 4443145 - 4443936 | 28245.1 |
| atp-dependent rna helicase | BK658_20695 | Not Available | Positive | 4444359 - 4446032 | 60731.6 |
| dioxygenase | BK658_20700 | Not Available | Negative | 4446220 - 4446987 | 27686.0 |
| thiopurine s-methyltransferase | BK658_20705 | Not Available | Positive | 4447091 - 4447747 | 24748.7 |
| zinc metalloprotease htpx | BK658_20710 | Not Available | Negative | 4447803 - 4448690 | 32396.8 |
| aminotransferase | BK658_20715 | Not Available | Negative | 4449004 - 4450215 | 44817.1 |
| peptide-methionine (r)-s-oxide reductase | BK658_20720 | Not Available | Positive | 4450438 - 4450833 | 14792.7 |
| glutathione peroxidase | BK658_20725 | Not Available | Positive | 4451024 - 4451509 | 17756.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
