Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greab | BK658_20630 | Not Available | Negative | 4433314 - 4433796 | 17632.0 |
| hypothetical protein | BK658_20635 | Not Available | Negative | 4433799 - 4434200 | 15063.1 |
| hypothetical protein | BK658_20640 | Not Available | Positive | 4434323 - 4435456 | 42738.9 |
| elongation factor p | BK658_20645 | Not Available | Positive | 4435505 - 4436074 | 21151.2 |
| organic hydroperoxide resistance protein | BK658_20650 | Not Available | Negative | 4436151 - 4436570 | 14260.9 |
| marr family transcriptional regulator | BK658_20655 | Not Available | Negative | 4436812 - 4437273 | 17189.9 |
| hypothetical protein | BK658_20660 | Not Available | Positive | 4437450 - 4438199 | 26245.3 |
| lysr family transcriptional regulator | BK658_20665 | Not Available | Negative | 4438189 - 4439079 | 33308.4 |
| hypothetical protein | BK658_20670 | Not Available | Positive | 4439141 - 4439356 | 8366.11 |
| cytoplasmic protein | BK658_20675 | Not Available | Positive | 4439421 - 4440644 | 46192.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
