Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | BK658_20530 | Not Available | Negative | 4415276 - 4416757 | 52488.5 |
| hydrolase tatd | BK658_20535 | Not Available | Negative | 4416867 - 4417673 | 29972.7 |
| lytic transglycosylase f | BK658_20540 | Not Available | Positive | 4417907 - 4419328 | 52925.3 |
| doxx family protein | BK658_20545 | Not Available | Positive | 4419432 - 4419866 | 14813.5 |
| hypothetical protein | BK658_20550 | Not Available | Positive | 4420116 - 4420424 | 11286.6 |
| transcription elongation factor greb | BK658_20555 | Not Available | Negative | 4420578 - 4421075 | 18689.2 |
| abc transporter permease | BK658_20560 | Not Available | Negative | 4421110 - 4423614 | 89227.2 |
| abc transporter | BK658_20565 | Not Available | Negative | 4423614 - 4424300 | 24585.4 |
| arylesterase | BK658_20570 | Not Available | Positive | 4424311 - 4424916 | 21419.2 |
| hypothetical protein | BK658_20575 | Not Available | Positive | 4424975 - 4425268 | 11186.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
