Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit kdpa | BK658_20480 | Not Available | Positive | 4403349 - 4405043 | 60230.2 |
| potassium-transporting atpase subunit b | BK658_20485 | Not Available | Positive | 4405055 - 4407133 | 73099.0 |
| potassium-transporting atpase subunit c | BK658_20490 | Not Available | Positive | 4407188 - 4407733 | 18727.8 |
| histidine kinase | BK658_20495 | Not Available | Positive | 4407873 - 4410524 | 96389.7 |
| dna-binding response regulator | BK658_20500 | Not Available | Positive | 4410573 - 4411262 | 25351.7 |
| alpha/beta hydrolase | BK658_20505 | Not Available | Negative | 4411381 - 4412418 | 38138.9 |
| hypothetical protein | BK658_20510 | Not Available | Positive | 4412643 - 4412921 | 9969.96 |
| metal-chelation protein chad | BK658_20515 | Not Available | Positive | 4413019 - 4413786 | 28576.1 |
| acyl-coa thioesterase ii | BK658_20520 | Not Available | Positive | 4413909 - 4414706 | 28829.7 |
| terminase | BK658_20525 | Not Available | Negative | 4414712 - 4415074 | 13626.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
