Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome biogenesis protein ccmf | BK658_20430 | Not Available | Positive | 4394827 - 4396815 | 72421.7 |
| thiol:disulfide interchange protein | BK658_20435 | Not Available | Positive | 4396812 - 4397348 | 19992.6 |
| cytochrome c-type biogenesis protein ccmh | BK658_20440 | Not Available | Positive | 4397345 - 4397818 | 17630.2 |
| c-type cytochrome biogenesis protein ccmi | BK658_20445 | Not Available | Positive | 4397811 - 4399019 | 43221.8 |
| hypothetical protein | BK658_20450 | Not Available | Positive | 4399033 - 4399434 | 14475.1 |
| gntr family transcriptional regulator | BK658_20455 | Not Available | Positive | 4399560 - 4400213 | 24656.4 |
| hypothetical protein | BK658_20460 | Not Available | Positive | 4400229 - 4401080 | 31944.9 |
| duf2897 domain-containing protein | BK658_20465 | Not Available | Negative | 4401197 - 4401364 | 6232.51 |
| ethanolamine permease | BK658_20470 | Not Available | Negative | 4401488 - 4402852 | 48193.2 |
| potassium-transporting atpase subunit f | BK658_20475 | Not Available | Positive | 4403251 - 4403340 | 3141.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
