Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| motility accessory factor maf-2 | BK658_20180 | Not Available | Positive | 4348743 - 4350035 | 48279.5 |
| hypothetical protein | BK658_20185 | Not Available | Positive | 4350032 - 4350304 | 10165.2 |
| flagellin | BK658_20190 | Not Available | Positive | 4350554 - 4351405 | 28868.9 |
| flagellar biosynthesis protein flag | BK658_20195 | Not Available | Positive | 4351479 - 4351841 | 12738.0 |
| flagellar hook protein flid | BK658_20200 | Not Available | Positive | 4351925 - 4353337 | 47024.4 |
| flagellar export chaperone flis | BK658_20205 | Not Available | Positive | 4353468 - 4353863 | 14210.3 |
| flagellar protein flit | BK658_20210 | Not Available | Positive | 4353874 - 4354170 | 11080.1 |
| sigma-54-dependent fis family transcriptional regulator | BK658_20215 | Not Available | Positive | 4354341 - 4355816 | 55438.7 |
| pas domain-containing sensor histidine kinase | BK658_20220 | Not Available | Positive | 4355927 - 4357144 | 44244.2 |
| sigma-54-dependent fis family transcriptional regulator | BK658_20225 | Not Available | Positive | 4357144 - 4358544 | 50479.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
