Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--scyllo-inositol aminotransferase | BK658_20130 | Not Available | Positive | 4336798 - 4337919 | 41040.2 |
| transferase | BK658_20135 | Not Available | Positive | 4337916 - 4338581 | 23395.2 |
| cephalosporin hydroxylase | BK658_20140 | Not Available | Positive | 4338607 - 4339335 | 27582.0 |
| glycosyl transferase family 2 | BK658_20145 | Not Available | Positive | 4339391 - 4342321 | 109060.0 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | BK658_20150 | Not Available | Positive | 4342432 - 4343601 | 42852.4 |
| pseudaminic acid biosynthesis-associated methylase | BK658_20155 | Not Available | Positive | 4343636 - 4344256 | 23498.0 |
| pseudaminic acid cytidylyltransferase | BK658_20160 | Not Available | Positive | 4344253 - 4344960 | 25985.9 |
| udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolase | BK658_20165 | Not Available | Positive | 4344957 - 4346462 | 54903.4 |
| pseudaminic acid synthase | BK658_20170 | Not Available | Positive | 4346455 - 4347507 | 37664.2 |
| 3-oxoacyl-acp synthase | BK658_20175 | Not Available | Positive | 4347734 - 4348660 | 33024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
