Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK658_19880 | Not Available | Positive | 4281572 - 4282465 | 33254.0 |
| dtw domain-containing protein | BK658_19885 | Not Available | Positive | 4282479 - 4283078 | 21793.7 |
| hypothetical protein | BK658_19890 | Not Available | Negative | 4283131 - 4285071 | 71857.2 |
| hypothetical protein | BK658_19895 | Not Available | Negative | 4285212 - 4285607 | 14588.7 |
| hypothetical protein | BK658_19900 | Not Available | Negative | 4285618 - 4286205 | 22046.7 |
| atp-dependent dna helicase recq | BK658_19905 | Not Available | Positive | 4286481 - 4288610 | 78815.0 |
| marr family transcriptional regulator | BK658_19910 | Not Available | Positive | 4288729 - 4289163 | 16326.9 |
| hypothetical protein | BK658_19915 | Not Available | Positive | 4289276 - 4290928 | 58430.1 |
| hypothetical protein | BK658_19920 | Not Available | Negative | 4290975 - 4293164 | 80634.1 |
| selenoprotein | BK658_19925 | Not Available | Positive | 4293235 - 4293522 | 10673.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
