Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | BK658_19830 | Not Available | Positive | 4272079 - 4272471 | 14316.5 |
| hypothetical protein | BK658_19835 | Not Available | Negative | 4272468 - 4273337 | 33343.9 |
| hypothetical protein | BK658_19840 | Not Available | Negative | 4273514 - 4273693 | 6129.39 |
| gntr family transcriptional regulator | BK658_19845 | Not Available | Positive | 4274055 - 4274891 | 30995.3 |
| eama family transporter | BK658_19850 | Not Available | Positive | 4275034 - 4275918 | 31926.0 |
| hypothetical protein | BK658_19855 | Not Available | Negative | 4275866 - 4277044 | 40897.4 |
| lysr family transcriptional regulator | BK658_19860 | Not Available | Positive | 4277148 - 4278083 | 33813.7 |
| hypothetical protein | BK658_19865 | Not Available | Negative | 4278096 - 4278416 | 11697.1 |
| sodium:solute symporter | BK658_19870 | Not Available | Negative | 4278454 - 4279833 | 48780.6 |
| agmatinase | BK658_19875 | Not Available | Negative | 4280249 - 4281199 | 34248.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
