Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | BK658_19720 | Not Available | Positive | 4237327 - 4238169 | 31413.1 |
| hypothetical protein | BK658_19725 | Not Available | Positive | 4238166 - 4238606 | 16457.2 |
| dna-binding response regulator | BK658_19730 | Not Available | Positive | 4238816 - 4239442 | 22936.9 |
| hybrid sensor histidine kinase/response regulator | BK658_19735 | Not Available | Positive | 4239448 - 4243110 | 135607.0 |
| hypothetical protein | BK658_19740 | Not Available | Positive | 4243507 - 4244823 | 48042.4 |
| hypothetical protein | BK658_19750 | Not Available | Positive | 4246208 - 4246696 | 16932.1 |
| pilus assembly protein papc | BK658_19755 | Not Available | Positive | 4246798 - 4249320 | 91607.6 |
| pilus assembly protein | BK658_19760 | Not Available | Positive | 4249389 - 4250132 | 27503.8 |
| hypothetical protein | BK658_19765 | Not Available | Positive | 4250472 - 4250954 | 17333.8 |
| hypothetical protein | BK658_19770 | Not Available | Positive | 4251023 - 4252276 | 46184.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
