Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | BK658_19570 | Not Available | Positive | 4209479 - 4211032 | 56437.6 |
| type iii secretion regulator inve | BK658_19575 | Not Available | Positive | 4211034 - 4212137 | 41136.5 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | BK658_19580 | Not Available | Positive | 4212159 - 4214210 | 75454.8 |
| hypothetical protein | BK658_19585 | Not Available | Positive | 4214222 - 4214629 | 14755.7 |
| escn/yscn/hrcn family type iii secretion system atpase | BK658_19590 | Not Available | Positive | 4214626 - 4215915 | 46401.7 |
| hypothetical protein | BK658_19595 | Not Available | Positive | 4215899 - 4216354 | 17601.3 |
| hypothetical protein | BK658_19600 | Not Available | Positive | 4216351 - 4217496 | 39180.0 |
| hypothetical protein | BK658_19605 | Not Available | Positive | 4217493 - 4218401 | 33727.9 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | BK658_19610 | Not Available | Positive | 4218394 - 4219056 | 24257.0 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | BK658_19615 | Not Available | Positive | 4219066 - 4219320 | 9412.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
