Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | BK658_19420 | Not Available | Positive | 4175771 - 4176568 | 29572.1 |
| reactive intermediate/imine deaminase | BK658_19425 | Not Available | Positive | 4176598 - 4176987 | 14090.7 |
| iclr family transcriptional regulator | BK658_19430 | Not Available | Positive | 4177164 - 4177928 | 28518.0 |
| amino acid deaminase | BK658_19435 | Not Available | Positive | 4177966 - 4179183 | 43183.1 |
| ketodeoxygluconokinase | BK658_19440 | Not Available | Positive | 4179330 - 4180265 | 33774.0 |
| peptidylprolyl isomerase | BK658_19445 | Not Available | Negative | 4180402 - 4180677 | 10093.5 |
| hybrid sensor histidine kinase/response regulator | BK658_19450 | Not Available | Negative | 4180731 - 4183268 | 94125.8 |
| type iv pili twitching motility protein pilt | BK658_19455 | Not Available | Positive | 4183412 - 4184530 | 41684.1 |
| acetoacetate--coa ligase | BK658_19460 | Not Available | Negative | 4184550 - 4186505 | 72228.4 |
| 3-hydroxybutyrate dehydrogenase | BK658_19465 | Not Available | Negative | 4186597 - 4187370 | 26655.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
