Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_19370 | Not Available | Positive | 4162255 - 4162989 | 27749.2 |
| hypothetical protein | BK658_19375 | Not Available | Negative | 4163041 - 4165050 | 74030.9 |
| duf4434 domain-containing protein | BK658_19380 | Not Available | Negative | 4165246 - 4166127 | 32429.4 |
| phage receptor | BK658_19385 | Not Available | Negative | 4166127 - 4169291 | 118822.0 |
| type ii secretion system protein e | BK658_19390 | Not Available | Negative | 4169288 - 4171462 | 82584.5 |
| udp-n-acetylglucosamine 2-epimerase | BK658_19395 | Not Available | Negative | 4171459 - 4172610 | 42898.8 |
| thiol reductase thioredoxin | BK658_19400 | Not Available | Negative | 4172727 - 4173179 | 17103.8 |
| abc transporter substrate-binding protein | BK658_19405 | Not Available | Positive | 4173538 - 4174386 | 30997.8 |
| amino acid abc transporter permease | BK658_19410 | Not Available | Positive | 4174439 - 4175101 | 24369.8 |
| abc transporter permease | BK658_19415 | Not Available | Positive | 4175112 - 4175774 | 24413.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
