Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haaap family serine/threonine permease | BK658_19270 | Not Available | Positive | 4132358 - 4133638 | 46103.7 |
| acyl-homoserine-lactone synthase | BK658_19275 | Not Available | Negative | 4133620 - 4134282 | 25019.8 |
| luxr family transcriptional regulator | BK658_19280 | Not Available | Negative | 4134313 - 4135038 | 27596.9 |
| alpha/beta hydrolase | BK658_19285 | Not Available | Negative | 4135155 - 4136039 | 32766.1 |
| hypothetical protein | BK658_19290 | Not Available | Positive | 4136366 - 4138006 | 57462.4 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | BK658_19295 | Not Available | Negative | 4138079 - 4140679 | 93417.3 |
| duf1289 domain-containing protein | BK658_19300 | Not Available | Positive | 4141088 - 4141558 | 18545.4 |
| methionine synthase | BK658_19305 | Not Available | Negative | 4142090 - 4145800 | 135640.0 |
| peptidylprolyl isomerase | BK658_19310 | Not Available | Positive | 4145956 - 4148247 | 86939.1 |
| fe/s biogenesis protein nfua | BK658_19315 | Not Available | Positive | 4148359 - 4148943 | 20994.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
